YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PME14_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFFILFLSI ISPIESVDQR IHHPSKCDHL SKFPTKGFTM VLKVSLNGCG RFKRVQDAID  60
   61 ASIGSSQSKT LILIDFGIYR ERFIVHENKN NLVVQGMGYS RTSIEWNNTT ASSNGTFSSF 120
  121 SVAVFGEKFT AYNISFKNTA PAPNPGAVDA QAVALKVVGD KAAFYGCGFY GNQDTLLDQE 180
  181 GRHFFKGCFI EGSIDFIFGN GRSLYEDCTL HSIAKENTIG CITANGKDTL KDRTGFVFVN 240
  241 CKITGSARVW LGRAWRPYAR VIFSKTYMSR VVSLDGWNDM GDPKTQRTVY YGEHRCYGPG 300
  301 ANHSKRVTYA KLLSDVEAAP FTNISFIDGE EWL

Type	Start	End	Confidence
Signal Peptide	1	16	0.85
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	333	0.99