YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RHA2A_ARATH
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLQGQLSDV SSDSIPLMLL SLLAVFINHL RSFLLRLTSK SNPNLPVDDV SIASGLANII  60
   61 VLADQLSLNR LFSYRCGDGG GGGSDCVVCL SKLKEGEEVR KLECRHVFHK KCLEGWLHQF 120
  121 NFTCPLCRSA LVSDDCVSKT QRSVGRDLIS CFSLH

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.68
Transmembrane Helix	14	35	0.75
Cytoplasmic	36	155	0.58