YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADSL1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.34
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDTTKDDGS SQSKAVRGEK RAFFFRKWTR IDIARASAVG AVHLLCLLAP FNYKWEALRF  60
   61 GVILAIVTSL SITFSYHRNL THKSFKLPKW LEYPFAYSAL FALQGHPIDW VSTHRFHHQF 120
  121 TDSDRDPHSP IEGFWFSHVF WIFDTSYIRE KCGGRDNVMD LKQQWFYRFL RNTIGLHILT 180
  181 FWTLVYLWGG LPYLTCGVGV GGTIGYNGTW LINSACHIWG SRAWNTKDTS RNIWWLGPFT 240
  241 MGESWHNNHH AFEASARHGL EWYQVDLTWY LICFFQALGL ATDVKLPTDA QKRKLAFAR

Type	Start	End	Confidence
Cytoplasmic	1	30	0.98
Transmembrane Helix	31	51	0.93
Non-Cytoplasmic	52	56	0.84
Transmembrane Helix	57	77	0.91
Cytoplasmic	78	168	0.75
Transmembrane Helix	169	190	0.78
Non-Cytoplasmic	191	192	0.46
Transmembrane Helix	193	220	0.59
Cytoplasmic	221	231	0.64
Transmembrane Helix	232	246	0.34
Non-Cytoplasmic	247	266	0.55
Transmembrane Helix	267	286	0.60
Cytoplasmic	287	299	0.89