YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6403490
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKMDQRCLL STSASDTTSK HDSGKPETKS SEKNEKSGGS ESSDGGSDHK NERASGKDVR  60
   61 GGPVSWMSFF LLFATGAGLV YYYDTQKKRH IEDINKNSIA VKEGPSAGKA AIGGPFSLIR 120
  121 DDGKRVTEKN LMGKWTILYF GFTHCPDICP DELIKLAAAI DKIKENSGVD VVPVFISVDP 180
  181 ERDTVQQVHE YVKEFHPKLI GLTGSPEEIK SVARSYRVYY MKTEEEDSDY LVDHSIVMYL 240
  241 MSPEMNFVKF YGKNHDVDSL TDGVVKEIRQ YRK

Type	Start	End	Confidence
Cytoplasmic	1	62	0.63
Transmembrane Helix	63	83	0.72
Non-Cytoplasmic	84	273	0.87