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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLC8_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL  60
   61 LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL GRDGWLFSAI KLFLVASLAI 120
  121 LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI 180
  181 VLFLVQSVDR LILCLGCLWI KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE 240
  241 VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG 300
  301 YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK 360
  361 DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW RIKALEESGG WLERTTVEDM 420
  421 DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA 480
  481 MWKKANLILL FFLLRKLILP FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL 540
  541 PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK 600
  601 ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL 660
  661 ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle