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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8777472
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLEDMQEDT WCGTRPPITV SIPNILFGLV LRFFFERISF LIERYDDMTN FFLHKFALIM  60
   61 FIFVLYFREW RERELNPNHL FSRFPTNGYM ITVAPFVSLR FQFPLYIINR STLFFRERTQ 120
  121 YLVYNTCHIL RTTAKTMPVV AEYAKSNRSS CRSCSNKIAV KSLRLGLISK GRGGVDMTRW 180
  181 HHFDCFPTDS ESIASVDDIQ GLSALEKEDQ DALTKLVEQC GKVPAKKQPD EKKGKAKKHI 240
  241 MGPKGLTKAA TSSKVIADNA KSSRSSCNRC SQTIVSKDLR VGLVTEDSRG FDITRWHHLG 300
  301 CFPIDFHPID SVEDIGGYSS LEKGDQMELK YLAEDVQKMD EGDDEAIADN ELTEETKKGK 360
  361 HSPVAKLVEQ PGEPAKEDED EESKKPASDE ISEQKTKDVK NSPDSSKVIS EYAKSSRSTC 420
  421 KKCSQTIAAK ELRLGLVTRN FRGFDMKQWH HLGCFPVDSD PIVSVEDIGG FSELQSGDQD 480
  481 ALKELVQQCG KQTLVDKMDE DNDDTEAKIK LTEETNKRKH SEVGEMVEED ESLTKAKQQM 540
  541 AKTHKVNMSE STSQVEVEAE ITLSASDVKD KYRDANLLPK WKAFETVIFL ERDDGLNDSE 600
  601 KIAAFDFDGC LAKTSVKIVG ADAWSLMYPS IPEKLQSLHD QGYKLVIFTN ESNIDRWKNK 660
  661 RQAAVDSKIG RLNSFIERVK VPIQVFIACG VSSSGGKGGK DDLYRKPKAG MWQLMKKHFN 720
  721 SGIAIDMDKS FYVGDAAGRK MDHSDADIKF AQASGLKFFT PEEYFIPSST SPGT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle