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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10176951
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQPRYTRID NRRPSSNYCS TVTVVVFVAL CLVGIWMMTS SSVGPAQNVD EVSLDNKDGI  60
   61 KKQMTPPAEE GNGQKFEDAP VETPNEDKKG DGDASLPKED ESSSKQDNQE EKKEEKTKEE 120
  121 FTPSSETKSE TEGGEDQKDD SKSENGGGGD LDEKKDLKDN SDEENPDTNE KQTKPETEDN 180
  181 ELGEDGENQK QFESDNEQEG QSKNETSGDL SPPGAQLELL NETTAQNGSF STQATESKNE 240
  241 KEAQKGSGDK LDYKWALCNT TAGPDYIPCL DNVQAIRSLP STKHYEHRER HCPDSPPTCL 300
  301 VPLPDGYKRP IEWPKSREKI WYTNVPHTKL AEYKGHQNWV KVTGEYLTFP GGGTQFKHGA 360
  361 LHYIDFIQES VPAIAWGKRS RVVLDVGCGV ASFGGFLFDR DVITMSLAPK DEHEAQVQFA 420
  421 LERGIPAISA VMGTTRLPFP GRVFDIVHCA RCRVPWHIEG GKLLLELNRV LRPGGFFVWS 480
  481 ATPVYQKKTE DVEIWKAMSE LIKKMCWELV SINKDTINGV GVATYRKPTS NECYKNRSEP 540
  541 VPPICADSDD PNASWKVPLQ ACMHTAPEDK TQRGSQWPEQ WPARLEKAPF WLSSSQTGVY 600
  601 GKAAPEDFSA DYEHWKRVVT KSYLNGLGIN WASVRNVMDM RAVYGGFAAA LRDLKVWVMN 660
  661 VVPIDSPDTL AIIYERGLFG IYHDWCESFS TYPRSYDLLH ADHLFSKLKQ RCNLTAVIAE 720
  721 VDRVLRPEGK LIVRDDAETI QQVEGMVKAM KWEVRMTYSK EKEGLLSVQK SIWRPSEVET 780
  781 LTYAIG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle