YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9757809
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.14
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASTVFPGF KFSPTDVELI SYYLKRKMDG LERSVEVIPD LEIYNFEPWD LPDKSIVKSD  60
   61 SEWFFFCARG KKYPHGSQNR RATKMGYWKA TGKERDVKSG SEVIGTKRTL VFHIGRAPKG 120
  121 ERTDWIMHEY CVKGVSLDDA MVVCRVRRNK EYNSGTSQKA PKPNSSAEKH AKVQNGATSS 180
  181 GSPSDWDNLV DFYLAGESGE KLLAEMAESS ENLQVDNDED FFADILRDEI INLDEAVMTG 240
  241 NTPNEVPTLE SASMEIRVLP LPNMIDKQMS SLLEERPSQK KKGKDATESL SSCFVGLYSI 300
  301 KSVNKARWDV IIGVVALIAM LFYLE

Type	Start	End	Confidence
Non-Cytoplasmic	1	305	0.54
Transmembrane Helix	306	324	0.57
Cytoplasmic	325	325	0.14