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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA18_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKWGILLLV TLSVSIIFTS AAADDYVRPK PRETLQFPWK QKSSSVPEQV HISLAGDKHM  60
   61 RVTWVTNDKS SPSFVEYGTS PGKYSYLGQG ESTSYSYIMY RSGKIHHTVI GPLEADTVYY 120
  121 YRCGGEGPEF HLKTPPAQFP ITFAVAGDLG QTGWTKSTLD HIDQCKYAVH LLPGDLSYAD 180
  181 YMQHKWDTFG ELVQPLASVR PWMVTQGNHE KESIPFIVDE FVSFNSRWKM PYEESGSNSN 240
  241 LYYSFEVAGV HAIMLGSYTD YDRYSDQYSW LKADLSKVDR ERTPWLIVLF HVPWYNSNNA 300
  301 HQHEGDEMMA EMEPLLYASG VDIVFTGHVH AYERTKRVNN GKSDPCGPVH ITIGDGGNRE 360
  361 GLARKYKDPS PEWSVFREAS FGHGELQMVN STHALWTWHR NDDDEPTRSD EVWLNSLVNS 420
  421 GCLKKRPQEL RKMLLEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle