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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NAC78_ARATH
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL  60
   61 KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE IRNGSRVVGM KKTLVYHKGR 120
  121 APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE 180
  181 EDGMTYVPAQ DAFSEGLALN DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES 240
  241 GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD 300
  301 ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ 360
  361 DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK PAPKELEKEV AGGKEAVEEK 420
  421 ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS 480
  481 GSVHVTAGMM RISNMTLAAD SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT 540
  541 RAMLVFMCLW VLLLSVSFKI VTMVSAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle