YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KCR2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGACISESQ PWYLHFVCFI GFLFLLRVLF IPLLKWFTTR FLLTPKRLKR YGSWAMVTGA  60
   61 TEGIGRAFAH ELAKHGLNLI LVSRNLSKLE SVSDDFQQEF PHIKIKIIPF DFSSEGGYGA 120
  121 IEEGIKGLEV GILINNVGIT YPRAMFFHEV DQLTWTKILR VNLEATTWVT RSLIGPMLHR 180
  181 RRGAIVNISS GAAVVVPSHP LYAIYAATKA YVDALSRSLH VEYKQFGIDV QCQVPLYVST 240
  241 RMVSEVAAID KPSLFVPSPE VYAKAAVAQI GIGSRCSPFW AHSLQWFLVG LVPDNLVDTW 300
  301 RLSIGLRRRS LS

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.66
Transmembrane Helix	12	34	0.88
Cytoplasmic	35	183	0.53
Transmembrane Helix	184	203	0.39
Non-Cytoplasmic	204	312	0.74