YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4559370, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIFSKLHLL FFSFIIATCT ISIVSGTVFT LSNRCNFTVW PGILTANRTL LRGGGFALAS  60
   61 GSSVNLTVSP ENVKMHRCKR STTSHTSRIQ NRLLWKEIHR TRFLRRESRR RLQRSELRVN 120
  121 GSSGVVACKS ACEAFNKPEY CCTGAFSKPE TCPPTKYSKI FKGACPTAYS YVYDYASSRF 180
  181 TCTSANYVIS FCS

Type	Start	End	Confidence
Cytoplasmic	1	8	0.64
Transmembrane Helix	9	31	0.70
Non-Cytoplasmic	32	193	0.56