YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15240586, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCAITEDDL ISPYLIIFKS LLLIPISHYL IFFFLTILLF LYFFLEIHFP KADPISLTFN  60
   61 PNSDFCKFIV SKCRLLHGRY FPTFWLSSPH LQTAFLTLFG KSPPFSYKRI LYQATDGGTI 120
  121 ALDWLMHSDV VEGISQVVNA SNPGTDRTPI AIIVPGLTSD SSAAYIKHIA FRLAKEGWNV 180
  181 VVQNHRGLGG ISLTSDCVYT AGWTEDLRKV IAHIHSQFPE APLFAVGTSI GANVLVKYLG 240
  241 EDGPNTPLIG ATAVCSPWDL LICDRFINRK LVQKVYDRML TIGLQGYAQL HHSIISRIAD 300
  301 WEGIKKSRSV REFDNYATRL VAKFETTDTY YRRSSSSQYV ENVAVPLLCI SALDDPVCTR 360
  361 EAIPWDECRA NKNIVLATTT HGGHLAYYEG LTASSMWWTR VVHEYFEVLL SSPFADRRHK 420
  421 IIPEPLGSSI DQGPFVDAGE HGMVAAASEV DTTRADAEPE DNAQIYVKTS NHLHKDNNPQ 480
  481 VYNNILGPLK KRVDQLSRYS RKSIWLLAYI AIVTTWPLVG PALLFSIKRR FRKLVEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle