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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTWVLNYLL VAFLFAISYN IDAASAGITR HYQFDIQLKN ITRLCKTKTI VTVNGKFPGP  60
   61 RVTAREGDNL QIKVVNHVSN NISIHWHGIR QLRSGWADGP SYVTQCPIRM GQSYVYNFTV 120
  121 TGQRGTLWWH AHIQWMRATV YGPLIILPKL HQPYPFPKPY KQVPILFGEW FNADPQAVVQ 180
  181 QALQTGAGPN ASDAHTFNGL PGPLYNCSTK DTYKLMVKPG KTYLLRLINA ALNDELFFTI 240
  241 ANHTLTVVEA DACYVKPFQT NIVLLGPGQT TNVLLKTKPI YPNATFYMLA RPYFTGQGTI 300
  301 DNTTVAGILQ YQHHTKSSKN LSIIKPSLPP INSTSYAANF TKMFRSLASS TFPANVPKVV 360
  361 DKQYFFAIGL GTNPCPKNQT CQGPTNTTKF AASINNVSFI LPNKTSLLQS YFVGKSKNVF 420
  421 MTDFPTAPII PFNYTGTPPN NTMVSRGTKV VVLKYKTTVE LVLQGTSILG IEAHPIHLHG 480
  481 FNFYVVGQGF GNFNPARDPK HYNLVDPVER NTINIPSGGW VAIRFLADNP GVWLMHCHIE 540
  541 IHLSWGLTMA WVVLDGDLPN QKLLPPPSDF PKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle