YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FAP1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFRFPFSF SQPPRATTSF SGFSISAVAV SVTVGAAAAG AAIAASRNPS HPILEWAFSS  60
   61 HRSSLSPWGS ITLADESVVE PKTGFSFPAS IGDSRRLLGV GLRKKSLLGL KNIDVYAFGV 120
  121 YADCDDVKKL VGDKYANLPA SEIRGNKSFM DDLMEADIKM TIRLQIVYGK LNIRSVRNAF 180
  181 QESVGNRLKK FGGSDNDELL QSFTSLFKDE YKIPRNSTID LTKDPGHVLS VAIEGNHVGS 240
  241 VKSHLLCRSI LDLYIGEEPF DKNAREDFLD NAASLAFDN

Type	Start	End	Confidence
Signal Peptide	1	41	0.90
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	279	0.99