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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME7_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESPIFILIT LSFFLQSVLA SSQTLSNSST ICKTTPDPKY CKSVFPHSQG NVQQYGCFSI  60
   61 RKSLSQSRKF IRTVDRYIKR NAHLSQPAVI RALQDCRFLA GLTMDYLLTS FETVNDTSAK 120
  121 TSFKPLSFPK ADDIQTLLSA ALTNEQTCLE GLTTAASYSA TWTVRTGVAL PLVNDTKLLG 180
  181 VSLALFTKGW VPKKKKRAGF AWAQPRSGSS THTKPFRLFR NGALPLKMTE KTKAVYESLS 240
  241 RRKLADGDSN GDGDDGSMVL ISDIVTVSQD GTGNFTNITA AVAAAPNNTD GSAGFFLIYV 300
  301 TAGIYEEYIS IAKNKRYMMM IGDGINQTVV TGNRSVVDGW TTFNSATFAV TAPNFVAVNI 360
  361 TFRNTAGPEK HQAVALRSGA DFSIFYSCSF EAYQDTLYTH SLRQFYRECD VYGTVDFIFG 420
  421 NAAVVFQNCN LYPRKPMPNQ FNAITAQGRS DPNQNTGTSI QNCTIKPADD LVSSNYTVKT 480
  481 YLGRPWKEYS RTVYMQSYID GFVEPVGWRE WNGDFALSTL YYAEYNNTGP GSNTTNRVTW 540
  541 PGYHVINSTD AANFTVTGLF IEADWIWKTG VPYTSGLIS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle