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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2317902, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPRQRKGE AMMNPTISWR FASSTSLLSI PRTPKSAFIF AMTFSSSSSS SSSSSSVENP  60
   61 NKDDSSSSLE LVLKYHNQTK HSLNGYARGP RGLDWANQPN PFRRYLSAPL LPLQHPNHDI 120
  121 DDDSDSPLYS TLFDSLPPPK PISLPTISHL FYHSLALSAW KTTGSSTWPL RVNPSSGNLH 180
  181 PTEAYLIAPP IPSLSQSAFV SHYAPKEHSL EVRAHIPSSF FPNFFPENSF LIGISSIFWR 240
  241 EAWKYGERAF RYCNHDVGHA IAALSIAAAD LGWDLKLLDA FGADDLKRLM GLPEFQLPEG 300
  301 KGKAELPEIE FEHPDCLLLV FPNGTSREHL NLDYLAISSA LRDFPSLEWT GNPNTLSKEH 360
  361 LCWDIIYRTA KAVEKPPLIY STSSSSIDVA SFTSSRALFS HSSYNKLTVR QVVRTRRSAV 420
  421 DMDAVTCIDM SSFYQMLMHC LPSTGESQKE QLALPFRALP WDTAEVHLAL FVHRVSGLPK 480
  481 GLYLLVRNED HLSDLKTATR PEFEWTKPDG CPDNLPLYKL AEGDCQRLAK GLSCHQDIAG 540
  541 DGCFSLGMIA RFEPALREKG SWMYPRLFWE TGVVGQVLYL EAHAMGISAT GIGCYFDDPV 600
  601 HEVLGINDSS FQSLYHFTVG GPVVDKRIMT LPAYPGPTTT VA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle