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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25387148, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERHCVLVAT FLLMLHIVHA QDQIGFISVD CGLAPRESPY NEAKTGLTYT SDDGLVNVGK  60
   61 PGRIAKEFEP LADKPTLTLR YFPEGVRNCY NLNVTSDTNY LIKATFVYGN YDGLNVGPNF 120
  121 DLYFGPNLWT TVSSNDTIKE IIHVTKTNSL QVCLIKTGIS IPFINVLELR PMKKNMYVTQ 180
  181 GESLNYLFRV YISNSSTRIR FPDDVYDRKW YPYFDNSWTQ VTTTLDVNTS LTYELPQSVM 240
  241 AKAATPIKAN DTLNITWTVE PPTTKFYSYM HFAELQTLRA NDAREFNVTM NGIYTYGPYS 300
  301 PKPLKTETIY DKIPEQCDGG ACLLQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNGDDVD 360
  361 AIKNVQDTYG ISRISWQGDP CVPKLFLWDG LNCNNSDNST SPIITSLDLS SSGLTGSITQ 420
  421 AIQNLTNLQE LDLSDNNLTG EIPDFLGDIK SLLVINLSGN NLSGSVPPSL LQKKGMKLNV 480
  481 EGNPHLLCTA DSCVKKGEDG HKKKSVIVPV VASIASIAVL IGALVLFFIL RKKKSPKVED 540
  541 GRSPRSSEPA IVTKNRRFTY SQVAIMTNNF QRILGKGGFG MVYHGFVNGT EQVAVKILSH 600
  601 SSSQGYKEFK AEVELLLRVH HKNLVGLVGY CDEGENMALI YEYMANGDLK EHMSGTRNRF 660
  661 TLNWGTRLKI VVESAQGLEY LHNGCKPPMV HRDVKTTNIL LNEHFQAKLA DFGLSRSFPI 720
  721 EGETHVSTVV AGTPGYLDPE YYKTNWLTEK SDVYSFGIVL LELITNRPVI DKSREKPHIA 780
  781 EWVGVMLTKG DINSIMDPNL NEDYDSGSVW KAVELAMSCL NPSSARRPTM SQVVIELNEC 840
  841 IASENSRGGA SRDMDSKSSI EVSLTFDTEL SPTAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle