YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12324040, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHFSRLRQL LLLQPKFLSS QPRPLRSPPP TFLRSVMGSS SSFSSSSSKL LFRQLFENES  60
   61 STFTYLLADV SHPDKPALLI DPVDKTVDRD LKLIDELGLK LIYAMNTHVH ADHVTGTGLL 120
  121 KTKLPGVKSV ISKASGSKAD LFLEPGDKVS IGDIYLEVRA TPGHTAGCVT YVTGEGADQP 180
  181 QPRMAFTGDA VLIRGCGRTD FQEGSSDQLY ESVHSQIFTL PKDTLIYPAH DYKGFEVSTV 240
  241 GEEMQHNPRL TKDKETFKTI MSNLNLSYPK MIDVAVPANM VCGLQDVPSQ AN

Type	Start	End	Confidence
Signal Peptide	1	48	0.67
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	292	0.99