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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BGAL1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS  60
   61 TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG NYDLVKFVKL VQQSGLYLHL 120
  121 RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG 180
  181 PIILSQIENE YGPMEYELGA PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG 240
  241 FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY 300
  301 HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR 360
  361 MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH YNLPPWSISI LPDCKNTVYN 420
  421 TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY 480
  481 MTDVKVDANE GFLRNGDLPT LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR 540
  541 AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES 600
  601 LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS 660
  661 LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY HVPRSWLKPS GNLLVVFEEW 720
  721 GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV 780
  781 KFASFGTPEG TCGSYRQGSC HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL 840
  841 AVEAVCA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle