YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4538926, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNGNSTETK ESRRSKMRKK IQNFRSRRRL SRPGSGSVSG LASQRSVSAD DFAGIALLTL  60
   61 IGAEMKFKDK WLACVSFGEQ TFRSEISDST EKPIWNSTNR LLKNNIVGYC ELDLLDFVVQ 120
  121 EPDSTCKSFD LLDPASSNVV GSMFVSCSVE DPVETETCFA KRILSIVDYD EDGKLSFSEF 180
  181 SDLMNAFGNV VAANKKEELF KAADLNGDGV VTIDELAALL AVQQEQEPII NSCPVCGEAL 240
  241 QLDKLNAMIH MTLCFDEGTG NQMTGGFLTD RQASYGWMFK LSEWTHLSTY DVGLNTGSSA 300
  301 SHIVVIDRKT KRLVEELIDS KIVMSMRAIY QSKIGLRLMD QGAKEILQNL SEKQGKKMNS 360
  361 VESAQNIPSF LEFFKDQINM AEVKYPLDHF KVRKGNSWWS FYLQTFNEFF VRELKPGARP 420
  421 IACMDQDDVA VSAADCRLMA FQSVDDSTRF WIKGRKFSIK GLLGNDVQSD AFLDGSLVIF 480
  481 RLAPQDYHRF HSPVSGVIEK FVNVSGSLYT VNPIAVNSKY CNVFTENKRT IVIISTAEFG 540
  541 KVAFVAIGAT MVGSISFVRQ EGDHVKKGDE LGYFSFGGST VICVFEKDSI KIDEDLLANS 600
  601 ARSLETLVTV GMQLGVSFPK LENCVLEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle