YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15217717, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHSEQASAY KAVKNIVLVG RTGNGKSATG NSLIGKDVFV SEAKATGVTK TCQTYKAVTP  60
   61 GGSRINVIDT PGLFDLSVSA EFISKEIINC LRLAEGGLHV VVLVLSVRTR ITQEEENTLS 120
  121 TLQVLFGNEI LDYLIVLFTG GDELEANNQT LDDYFHQGCP YFLKTVLGLC DDRKVMFNNM 180
  181 TKDKHKKVEQ VQQFLALVAK VEERNEGKPF RGKMYLEIKE ETEWLKKQKK AVEASNLGEA 240
  241 ELAKMKKELQ MEHDTRMSQM EDMVKNMLKE TSAAHERMVS MLNENLENAH RENIDLRKAH 300
  301 DHEQKKRMMI QLGLGVPGAL GMIAPAALAM CSIL

Type	Start	End	Confidence
Cytoplasmic	1	307	0.83
Transmembrane Helix	308	330	0.83
Non-Cytoplasmic	331	334	0.70