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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK43_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTLISSLA VVLPLTLLAP SMSMKISRID VLGYICNNGT VSNEEAYRRS YQINLDAIRG  60
   61 DMRHVKFGTH EHGDPPERMY VLSQCVSDLS SDECSLCWSR ATDLLSQCFP ATGGWFHLDG 120
  121 CFVRADNYSF YQEPVSHQDT KICASDKEKS AEFKGLVKEV TKSIVEAAPY SRGFSVAKMG 180
  181 IRDLTVYGLG VCWRTLNDEL CKLCLADGAL SVTSCLPSKE GFALNAGCYL RYSNYTFYNE 240
  241 RGLLAMSFTK ENLTYIFVIS MVGVLAIAAG FWCGKCFYMR TSPKKKIKGT KTKKFHLFGH 300
  301 LRIEKESESI CTESHLMSFE YSTLKKATNN FNESCKLGVG GYGEVFKGTL SDGREIAIKR 360
  361 LHVSGKKPRD EIHNEIDVIS RCQHKNLVRL LGCCFTNMNS FIVYEFLANT SLDHILFNPE 420
  421 KKKELDWKKR RTIILGTAEG LEYLHETCKI IHRDIKASNI LLDLKYKPKI SDFGLAKFYP 480
  481 EGGKDIPASS LSPSSIAGTL GYMAPEYISK GRLSNKIDAY SFGVLVLEIT SGFRNNKFRS 540
  541 DNSLETLVTQ VWKCFASNKM EEMIDKDMGE DTDKQEMKRV MQIGLLCTQE SPQLRPTMSK 600
  601 VIQMVSSTDI VLPTPTKPPF LHDSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle