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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATL46_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWVRFTIEQ KDGNFAYPPP FYKDPILSPP SPPPPSSGNR ISPAVLFVIV ILAVLFFISG  60
   61 LLHLLVRFLI KHPSATASSR SNRFPEISTS DALQRQLQQL FHLNDSGLDQ AFIDALPVFH 120
  121 YKEIVGSAGG GGGNGAAQEP FDCAVCLCEF SEKDKLRLLP MCSHAFHLNC IDTWLQSNST 180
  181 CPLCRGTLFS PGFSMENPMF DFDDIREDEE GVTENGSQKT MEIQEIVVEK GVLPVRLGKF 240
  241 KRLDNVGNGQ GQDVVAGGET SSSNLDARRC FSMGSYQYIL GNSELKVPFA NDRLPRLKPQ 300
  301 DKESEQTGNS SSEDNKKINT VAKGESFSVS KIWLWPKKDK FSSDAQRRLP SSSLNVDDLP 360
  361 KLPWMEEHKK LENDGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle