YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15227662, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMCAARNTMS SSGSSPSGSD LQAFVMEFII TGFLMLVVCA VTTTKRTTEE LEGLIIGATV  60
   61 TLNVIFVGEV SGASMNPARS IGPALVWGCY KGIWIYLLAP TLGAVSRALI HKMLPSIPNA 120
  121 EPKFSKTGSS HKRVSDLPL

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.89
Transmembrane Helix	21	43	0.91
Cytoplasmic	44	52	0.79
Transmembrane Helix	53	73	0.91
Non-Cytoplasmic	74	91	0.71
Transmembrane Helix	92	110	0.87
Cytoplasmic	111	139	0.89