YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148745715, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVAGLVSLT ILYCSPSTPK NCPSPLPNLK QEESYSTKKS DALTNKIIED KPILLLWFWP  60
   61 ENYFFDFSDC KTIFNIDGCQ LTDNRLLYEK SDNVLIYHKA ISWDLSNLPP SPRPLFQKWI 120
  121 WFNVESPTNT RKKPGLENLF NLTLSYREDG DIPVRMRLKT RKTPADDFVI PKKDKLVCWI 180
  181 VSNKATYTGA GTRNKYYEEL RKHINVTVFG KAFEKFLDYN QYYPTLASCK FYLSFENSIH 240
  241 KDYITEKLNG PLAVGTVPVV LGPPRKNYEN FVPGDALFMC RTSQIQSHWQ NICFSWIKMT 300
  301 LHIGDTSTGG NILWQLLI

Type	Start	End	Confidence
Signal Peptide	1	19	0.64
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	318	0.99