YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150378436, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDRLEQLKS KSDQTADDVE IPMENKEFMD EFFAQIEEIR TSIDKIDENV VEIKRLYSVI  60
   61 LSAPTSEQKT QDELEAVTNE IKKLANNARN KLKSIEQNLA ANTEERVSAD MRIKKSQHAI 120
  121 LAKKFVEVMT KYNEAQVEFR EKSKGRIQRQ LEITGKATTD EELEEMLDGG NAAVFTAGIM 180
  181 DSGISKQALS EIEARHKDIM RLESSIKELH DMFVDIAVLV ENQGSMIDRI ESNMDQSVGF 240
  241 VERAVADTKK AAKFQQEARR VFFLIIIIII HYPLSFFIFF YFFLALMSCF FCMISTLFST 300
  301 PFPIILSLCF PSLSLYPDHL HPCRKR

Type	Start	End	Confidence
Cytoplasmic	1	260	0.94
Transmembrane Helix	261	284	0.90
Non-Cytoplasmic	285	290	0.65
Transmembrane Helix	291	316	0.79
Cytoplasmic	317	326	0.86