YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110742652, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRIRKATT TLLFSGGITH GTDRIARTGA LLSRWISSAS SSSAVVADDE SSGIYGLGSV  60
   61 LKEYEDYRRS LYGEITHKAL LVDAVGTLLV PAQPTAQIYK NIGEKYGVEY SEAEILTRYR 120
  121 RAYQKPWGGS HLRYVNDARP FWQYIVTAST GCSDSQYFEE LYSYFTTEQA WKLCDPDAGK 180
  181 VFKAIKEAGV KVAIVSNFDT RLRPLLRALR CEDWFDAVAV SAEVEAEKPN PTIFLKACEL 240
  241 LEVNPEDAVH VGDDRRNDVW GARDAGCDAW LWGSEVTSFK QVAQRIGVKV

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	290	0.99