YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2C09_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKFCCFTSA SEVVGGQSSS RSGKGRSDEG MIKYGFSLVK GKANHPMEDY HVANFINIQD  60
   61 HELGLFAIYD GHMGDSVPAY LQKRLFSNIL KEGEFWVDPR RSIAKAYEKT DQAILSNSSD 120
  121 LGRGGSTAVT AILINGRKLW IANVGDSRAV LSHGGAITQM STDHEPRTER SSIEDRGGFV 180
  181 SNLPGDVPRV NGQLAVSRAF GDKGLKTHLS SEPDIKEATV DSQTDVLLLA SDGIWKVMTN 240
  241 EEAMEIARRV KDPQKAAKEL TAEALRRESK DDISCVVVRF R

Type	Start	End	Confidence
Signal Peptide	1	16	0.62
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	281	0.99