YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GPAT2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGNKISTLQ ALVFFLYRFF ILRRWCHRSP KQKYQKCPSH GLHQYQDLSN HTLIFNVEGA  60
   61 LLKSNSLFPY FMVVAFEAGG VIRSLFLLVL YPFISLMSYE MGLKTMVMLS FFGVKKESFR 120
  121 VGKSVLPKYF LEDVGLEMFQ VLKRGGKRVA VSDLPQVMID VFLRDYLEIE VVVGRDMKMV 180
  181 GGYYLGIVED KKNLEIAFDK VVQEERLGSG RRLIGITSFN SPSHRSLFSQ FCQEIYFVRN 240
  241 SDKKSWQTLP QDQYPKPLIF HDGRLAVKPT PLNTLVLFMW APFAAVLAAA RLVFGLNLPY 300
  301 SLANPFLAFS GIHLTLTVNN HNDLISADRK RGCLFVCNHR TLLDPLYISY ALRKKNMKAV 360
  361 TYSLSRLSEL LAPIKTVRLT RDRVKDGQAM EKLLSQGDLV VCPEGTTCRE PYLLRFSPLF 420
  421 SEVCDVIVPV AIDSHVTFFY GTTASGLKAF DPIFFLLNPF PSYTVKLLDP VSGSSSSTCR 480
  481 GVPDNGKVNF EVANHVQHEI GNALGFECTN LTRRDKYLIL AGNNGVVKKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle