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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6686398
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVPNYHHS FFIFLILILF LAFSVSPNTL SATESLTISS NKTIISPSQI FELGFFNPAS  60
   61 SSRWYLGIWY KIIPIRTYVW VANRDNPLSS SNGTLKISGN NLVIFDQSDR PVWSTNITGG 120
  121 DVRSPVAAEL LDNGNFLLRD SNNRLLWQSF DFPTDTLLAE MKLGWDQKTG FNRILRSWKT 180
  181 TDDPSSGEFS TKLETSEFPE FYICSKESIL YRSGPWNGMR FSSVPGTIQV DYMVYNFTAS 240
  241 KEEVTYSYRI NKTNLYSRLY LNSAGLLQRL TWFETTQSWK QLWYSPKDLC DNYKVCGNFG 300
  301 YCDSNSLPNC YCIKGFKPVN EQAWDLRDGS AGCMRKTRLS CDGRDGFTRL KRMKLPDTTA 360
  361 TIVDREIGLK VCKERCLEDC NCTAFANADI RNGGSGCVIW TREILDMRNY AKGGQDLYVR 420
  421 LAAAELEDKR IKNEKIIGSS IGVSILLLLS FVIFHFWKRK QKRSITIQTP NVDQVRSQDS 480
  481 LINDVVVSRR GYTSKEKKSE YLELPLLELE ALATATNNFS NDNKLGQGGF GIVYKGRLLD 540
  541 GKEIAVKRLS KMSSQGTDEF MNEVRLIAKL QHINLVRLLG CCVDKGEKML IYEYLENLSL 600
  601 DSHLFDQTRS SNLNWQKRFD IINGIARGLL YLHQDSRCRI IHRDLKASNV LLDKNMTPKI 660
  661 SDFGMARIFG REETEANTRR VVGTYGYMSP EYAMDGIFSM KSDVFSFGVL LLEIISGKRN 720
  721 KGFYNSNRDL NLLGFVWRHW KEGNELEIVD PINIDSLSSK FPTHEILRCI QIGLLCVQER 780
  781 AEDRPVMSSV MVMLGSETTA IPQPKRPGFC IGRSPLEADS SSSTQRDDEC TVNQITLSVI 840
  841 DARNFSATES LTISSNKTII SPSQIFELGF FNPDSSSRWY LGIWYKIIPI RTYVWVANRD 900
  901 NPLSSSNGTL KISDNNLVIF DQSDRPVWST NITGGDVRSP VAAELLDYGN FVLRDSKNNK 960
  961 PSGFLWQSFD FPTDTLLSDM KMGWDNKSGG FNRILRSWKT TDDPSSGDFS TKLRTSGFPE1020
 1021 FYIYNKESIT YRSGPWLGNR FSSVPGMKPV DYIDNSFTEN NQQVVYSYRV NKTNIYSILS1080
 1081 LSSTGLLQRL TWMEAAQSWK QLWYSPKDLC DNYKECGNYG YCDANTSPIC NCIKGFEPMN1140
 1141 EQAALRDDSV GCVRKTKLSC DGRDGFVRLK KMRLPDTTET SVDKGIGLKE CEERCLKGCN1200
 1201 CTAFANTDIR NGGSGCVIWS GGLFDIRNYA KGGQDLYVRV AAGDLEDKRI KSKKIIGSSI1260
 1261 GVSILLLLSF IIFHFWKRKQ KRSITIQTPI VDLVRSQDSL MNELVKASRS YTSKENKTDY1320
 1321 LELPLMEWKA LAMATNNFST DNKLGQGGFG IVYKGMLLDG KEIAVKRLSK MSSQGTDEFM1380
 1381 NEVRLIAKLQ HINLVRLLGC CVDKGEKMLI YEYLENLSLD SHLFDQTRSS NLNWQKRFDI1440
 1441 INGIARGLLY LHQDSRCRII HRDLKASNVL LDKNMTPKIS DFGMARIFGR EETEANTRRV1500
 1501 VGTYGYMSPE YAMDGIFSMK SDVFSFGVLL LEIISGKRNK GFYNSNRDLN LLGFVWRHWK1560
 1561 EGKELEIVDP INIDALSSEF PTHEILRCIQ IGLLCVQERA EDRPVMSSVM VMLGSETTAI1620
 1621 PQPKRPGFCV GRSSLEVDSS SSTQRDDECT VNQVTLSVID AR

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