YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148726014, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGTKGHILR LMVMGVLLGT AVGYRAVQTP DYDDTTTPEI LNPSWMATIP DFFSLSDVTM  60
   61 PGTHNTMALY GGSLAECNSW SLSLQLRAGV RFLDIRVRHA RGNLTIHHGI SYQYAHFGDV 120
  121 LKDIVAFLKE YPSETVLMRL REELSDTQDI YGAVVRYINE YAHWDLLWHS REMPIMGEAR 180
  181 GKLIILQDFP GPDMGLRYNS LDIVDDWKVS SLQPEEVEKK WRSVSTHLEA AAVANKNLMF 240
  241 LTYSSGASIL AHPNSLARRI NPRLYEYLTA YSGQTKRFGI VAMDFPGAKL VQTIIGFNY

Type	Start	End	Confidence
Signal Peptide	1	23	0.55
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	299	0.90