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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|189535386, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHRFSKRGL SSTDNLPSGQ FSGSEEAPPH YSSYSNGIDT AITVDSPTRR SSEVLNSRQD  60
   61 SRRPSIYSTI DAMPHLEFYA NATTTGRIRR SRPSLETLRK VCDNGECGVN SGDSCAGSIA 120
  121 ALQETENKSE ENGETAKKSE PVRFGWVTGV MIRCMLNIWG VILFLRLSWI TSQAGILLTW 180
  181 LIILMSVLVT SITALSVSAI STNGRVSSGG AYFMISRTLG PELGGPIGVV FSFANALACA 240
  241 LNTVGFSETV RDLLINNSQI VDSVNDVRII GSITVTALLL ISLAGMEWES KTQILFFLVL 300
  301 MVSFTNYFVG SVIPATPQKQ SIGFFSYRSE IFVENLFPDW RGPDGDFFRM FAIFFPSAIG 360
  361 ILAGANISGD LKEPEIAIPR GTLMAIFCTT ISYLAISSTV GACVLRDASG NMNDSLPLNF 420
  421 TEACDSLSCS LGWNFTECEQ SGSCSYGLSN SFQVLVQVSG FGPLIYAGIF AATLSSALAF 480
  481 LVSAPKIFQC LCRDNIYPYI GFFGKGYGKN SEPLRAYLLC YIIAMCFILI AELNTIAPLI 540
  541 SNFFLCSYAL INFSCFHASI TNSPGWRPSF RYYSPWTGLF GAAISVVLMF LLTWWAALIS 600
  601 LALIIFLFGY VAYKKPEVNW GSSVQASTYN MALSYSVSLA GVEDHVKNYR PQCLVLTGPP 660
  661 TLRPALVDFV GSFTKNVSLM ICGDIIMEDE KSIMSECNTN EMLKWLNQRK VRSFYTAFRS 720
  721 SSLREGARHL LQASGLGKLR PNILVMGFKM NWQESNSQDI EDYINTIYDS FDSNHGVCVL 780
  781 RMMDGLDIRD ELQTEVNPVF EPDEPIEFDQ QNSDSDSDVD NTKNIANDQI KTVFQTKQGK 840
  841 KTIDVYWISD DGGLTLLVPY LLTRRKRWRR SKVRVFIVGE QKTMEDERKE MKTLLQRFRL 900
  901 DVHDVIVMTD SKRQPLAKKL NDAQLDERTV QQQRMENPWK VTDKQMDALR LKSERKVRLN 960
  961 EIIRRNSQHA ALVLVSLPVP QADCPSSLYM AWLDTLSCGL HCPVLLIRGN QQNVMTFYCQ1020
 1021 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle