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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148725634
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAFLLTLL LPVAVVSHTL ELPRSVQFKV GDRNELRCRM LSCPEKVKFV WTALGDKPIF  60
   61 ATPKTGDKET VLIFDNVTKN HANAIVCRAA CGKEMKELTT QVNVYSFPRN PVISGYDHLI 120
  121 MGKENILSCE VSSVYPSEYF DVEWLYENRV VHRESGDFDK DAVSIPYTFT PSSEDDGKAI 180
  181 TCRASLNIEG VPPEEKTKET SRHIKVLSAP HNVEVSGETA VSLGSSLTLT CEAEGNPKPA 240
  241 FTWTALKPDG HSVELGKQRD LFMHNVSLSD AGTYQCNVSN DLGNQMVNVS VVVQAPPVDT 300
  301 RIVASPQSSL NEGDSVTIFC KSSGVPVTRV VLSNVAKTIL KTKEGAETSV TIDSVKLSDT 360
  361 GMFVCEAFNE YGSQRTTLNL NVEAHLLEVE LQPNGTVVSD RGSSLVLSCQ ASGCPHPEFS 420
  421 WKNLSNMSVH RQPKTDGSLS QLLFDPVEVE DEGTYVCEVT CGSIKKSKQT EVKVFSFATC 480
  481 PIVKSSGPSL AGERMKLTCT VQDVFPVNLF QILWLDGERE IWREESQSFS SGSTDLTSVY 540
  541 SLQVDAEDQD RHITCKVLLD MHGVPPSQVV KTAFTTLSIH YPPRATRIIA SPLTKLKEGE 600
  601 PVSFSCLSDS FPAGRMVLSR VVDGIRTELK TIDGVETLFT LPSVTLDDAG IYVCEASNIY 660
  661 GNHSDSLEIT VKAPPRNTTV EIFPSTNVQE GQNITICCRS VSFPPPAVVL SKLDSETNIY 720
  721 SLDGVFILMN LTPNDTGLYQ VNVTNDLGYE TEVFNINVIE KRLDSPLGWT DFLTLAIFLG 780
  781 GSAALLGLVL YVWRERKKGF YDLTKGII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle