YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148725508
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRRVAVYGP SLSVRSVIAG FHDKGIMSRR LHARRLEGID KNIWVEFTQL AADYKAVNLG  60
   61 QGFPDFSPPS FIQEAFCNAL TGGFRMHQYT RAFGHPNLVK ILAKFFSRIV GREIDPMEDI 120
  121 LVSVGAYQAL FCTFQALVDE GDEVIIVEPF FDCYQPMVMM AGGTPVYVPL KPREGRGPAL 180
  181 TSADWVLSPE ELASKFTSQT KAIVINTPNN PLGKVYQWEE LQVIADLCIK HDVICISDEV 240
  241 YEWLTYDGAK HVKIASLPGM WERTVTIGSA GKTFSATGWK VGWAIGSGHI MKHLKTVHQN 300
  301 SVYHCATAAQ EAISVGFQRE YDVFGTEDSY FHQLPITLHE KRKRLADCLK SVGLKPILPQ 360
  361 GGYFMIADIS NINVDLNDPT TKEEPYDYRF VKWLIKEKGL ATIPVSAFYS PEHRDQFQKY 420
  421 IRFCFVKEDS TLQAAENILK QWSENK

Type	Start	End	Confidence
Signal Peptide	1	19	0.57
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	446	0.99