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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148725310
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIRKKRRPW CMETSFVLLL CLSMAQADPV DVLRVLQLPS LPEGVQKVPG FCTSRLSGTP  60
   61 DHAYRITKKA QISAPTKQLF SGRFPENFSI MTLVKAKAGL QAFLLSIYNE QGVQQLGLEL 120
  121 GRSPIFLYED QHRKPAPEDY PLFKGVNLAD GKWHRIAISV QKKNITLILD CKNRITKTLP 180
  181 RSNNPVLDTK GITVFGARLL DEEVFQGEIQ QLLIASNPQA AYDFCEHYSP DCDSPLPKVQ 240
  241 SQDPNTYQKT APAAKPAPAK PAKSKPTPAP KTAKSKPTAA QLLISKIKPT PASKLAAKPK 300
  301 ATPAPKNDKK KTNDNGKVNN GQTKVNGNGN GKSNGNGKDT NGKAKAGSNG KPNNNGNGNG 360
  361 KKTNGDAKIN GNGPKTVKTV TKVASAKKSE TPATKTVTGK PKAQVKAQPT KSKTDKTKAN 420
  421 ASPAKPKDTK AKAASVTQKP AVFKPTPVPL PRPSKTILDV NNVKSMSRNF PPFDKAVASV 480
  481 RAIKGEKGEP AVLEPGMLIE GPPGPEGPAG LPGPSGPQGQ PGSVGDPGER GPTGKAGLPG 540
  541 ADGVPGPPGT SVMLPFRFGQ SAGEKGPVAS AQEAQAQAIL SQARLALKGP SGPMGFTGRP 600
  601 GPLGTPGSPG FKGERGDPGA QGPRGPQGVS GPPGKAGRRG RAGADGARGM PGESGIKGDR 660
  661 GFDGLPGLPG DKGYRGQPGG MGPPGPHGED GERGDDGDVG PRGLPGEPGP RGLLGPKGPS 720
  721 GLPGPPGVRG NDGPHGPKGN LGPQGEPGPP GQQGAPGTQG MPGPQGATGP PGEKGPTGKP 780
  781 GLPGMPGADG PPGHPGKEGP GGTKGNQGPN GPQGSIGYPG PRGLKGAQGI RGLKGHKGEK 840
  841 GEDGFPGIKG DFGVKGERGE VGVPGPRGED GPEGPKGRVG PPGEIGPLGL LGEKGKLGVP 900
  901 GLPGYPGRQG IKGSLGFPGF PGTNGEKGTR GLIGKPGPRG QRGPTGPRGQ RGPRGATGKS 960
  961 GAKGGSGSDG PPGPPGERGL TGPQGANGFP GPKGPPGPPG KDGLPGHPGQ RGEVGFQGKV1020
 1021 GPPGPPGVVG PHGPSGETGQ MGERGHPGPP GPPGEQGLSG SSGKEGTKGD PGPPGGPGKD1080
 1081 GPPGLRGFPG ERGLPGTPGS GGLKGNEGPA GPPGPAGSSG ERGGAGTAGP VGPPGRPGPQ1140
 1141 GPPGTSGEKG VPGEKGPVGP AGRDGIQGPV GLPGPAGPPG ISGEDGDKGE VGEPGQKGAK1200
 1201 GSKGEHGPPG PPGPMGPVGQ PGAAGADGET GPRGQQGQFG AKGDEGTRGF PGPPGPIGLQ1260
 1261 GLPGPGGEKG ETGDVGPLGP PGPPGPRGPA GPNGADGPQG PPGGLGNPGP IGEKGEPGES1320
 1321 GPPGVGGEPG KLGPRGERGE KGESGQPGTP GPPGGKGPTG DDGPKGNPGP VGFPGDPGPP1380
 1381 GEVGPRGQDG AKGDRGEDGE QGEAGSPGPT GENGPPGPPG KRGPAGTRGP EGRQGEKGSK1440
 1441 GDSGALGPPG KTGPVGPQGQ PGKPGTEGLR GLPGTVGEQG SPGAAGPKGP PGPLGPPGLA1500
 1501 GLRGDPGAKG EKGHPGMLGL IGPAGEQGEK GDRGMPGPQG STGPKGETGI SGGTGPLGPA1560
 1561 GPAGMPGPRG VKGAKGASGG AGPKGEKGVQ GPPGPPGPPG DVIQPLPIQI PKKSKRSIDA1620
 1621 SKILSEADAE AADTTGSEFL TGNEGMEEIF GSLNSLRQEI ESMRFPLGTK ESPGRTCQDL1680
 1681 HLSQPDLKDG EYWIDPNQGC ARDSFKVYCN FTAGGETCLY PSKAVENVKM NSWIKEKPGS1740
 1741 LFSQFAKGNK FSYVDSVGEA VGVVQLGFLR LLSVQARQNL TYHCQRSVAW TDQTTDGGYK1800
 1801 RALRLQGAND EEISYETSPY IKALIDGCSY RKGLDRTVLE VNTPQVEQLP LLDIRISDFG1860
 1861 EDNQKFGFEV GPVCFLG

YRC Informatics Platform - Version 3.0
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