YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|153792045, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQLLLWAT LLCQICDGKA FPQRHKRTVW GPNMRQIEPV KDPSPSFSLL APAKIRPGTK  60
   61 QNILVEGHNL AKVVKVTVVV YDYPNSQTAL SRGSVSLNSD NNYSVLQTLE INPNLLLPDG 120
  121 KKKYVKLVAQ FSNIYRAEKV MAVSFRSGHI FIQTDKPIYN PGDKVRFRAF VSDLEFRSSE 180
  181 RTISLEIQNP DGIAVHGIGR VKAIDGVFSD IFSLSTVVKE GRWKVVAKFD QGKENVFSRE 240
  241 FEVKKYVLPA FNVTLTPKTS HLSLDAEKLE VEITARYLYG AQVKGVAYVL FGIEINGEKK 300
  301 RLTSMKQIDD VLNGGSVSLT MEEIKRAYPD INSLLGSTVY VKASVLTSSG SDLVEAEKSG 360
  361 IKIVNSPYML TIKDTPKYYK PGLPLAMTVI VSNHDGSPTP NIPVKVTFLK RPISVHSGTI 420
  421 NIHINMPKKR IPYGNSQMLK VETVDPSLKP EQQAIQEVYV KPYSTFRSHG NYLHVSVGAS 480
  481 RVVVGGSISV QVYIKSSLPN HRALVEHLTY IVLNKGKIIQ AGRVNVKGQD VTSVHLLITS 540
  541 EMLPAFRFVA YYVLPWQHRA EVVADSVFVD VEDRCVGSLN VGPVDGEIVS SYSPGSSFKF 600
  601 QVKGDVGAKV SLVAVDNAIF LLSKNRLTQK KVWEVVDQAD MGCTAGGGKD NMGVFSDAGL 660
  661 MFHSSTGGST DSKEDCSSKT KRRRRSAAKL QLRDQLEYDY MEEKVILRAR MIEPMPKLYA 720
  721 RANDVGVRQD SYREVVVEEE EEEAASVFEE DDLSDLEDIY VRSKFFESWL WTDIRLPSTA 780
  781 KSDGLAVFPV DTVLPDSITQ WGFLAVSASP EKGVCVAEPY NVRVWKPFFI DLRLPHSVSR 840
  841 NEQVEIKAVI HNYKNSTLEV RSTPSVNVVM VILEKTEDMC SVAYTGQHRQ QVTVAAGSSK 900
  901 LITYTIIPLK TGELPLQVTA VAASFMGQDA VKKNLRVVVE GIQTLKVRSF VLNPSEKGGS 960
  961 AGQQLIQVKK LQLDAVVPKS VPETFVNVRG DLLADSIDNS IKEDSLAALI RMPGGCVEQN1020
 1021 LARITLPLIA AHYLDRSADW EIVGISRREE AIKYIQKGYE NQLNYKKSDD SYPPYANEGT1080
 1081 STWITAYVVK VFSMAHSFIT VNEKHLCGPL LYLLKNKQGY DGTFQEDNPV YDTSMTGAMR1140
 1141 GSEYKASLTA FVLIALAEAQ DKVTCQDQEV NIRDKSRQAA GYLTEHFSRL TRPYTAAIAC1200
 1201 YALAVSNNAC VKSMLLKFAS PDHSHWPDSN NYFFTLEATG YALLALIKSG HMEEAEAPFR1260
 1261 WLNEHRGIGG GYGSTQSTMV VLQALSEYLV KRPPPSDLNL LVQLSVPGRS DVRWTFNPNL1320
 1321 AYVARSSRVP LDQEFSVAAS GNGKGVLEVL NVNVYQEYLE LEYKNQDIIY RLCVTEKTSS1380
 1381 DVEKSFRLNV NVRALEERQV RMVILDIGLP TGFEPENSDL ELLTNSVDRY INNFQVVDNL1440
 1441 SDRGSLIIHL FKVSNKEAEI ISFRLNQRFK VGLLQPSTVK VYQYYNKDKS CSRFYSPPED1500
 1501 KQQLDQICEG DVCRCSQGDC CVMKEDSASF GKEQRNAAVC NGLHHGEYFF GSNYSGLLFL1560
 1561 SMNNFSSAYR VKLISISQSH YYQYEMEIVQ VIKEGTEEGL NEKERRMFLS HASCRTRLNL1620
 1621 REGQEYLVIG PITDVWNAGS TVSNKYVYTL GKETWVERWP DESECGSTLQ KKCDELKSFA1680
 1681 KKLIEDGCQA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle