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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148725472, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQLLLWAT LLCQICDGKA FPQRHKRTVW RHMRQIEPVK DPSPSFSLLA PAKIRPGTKQ  60
   61 NILVEGHNLA QVVEVTVVVY DYPNSQTALS RGSVFLNSDN NYSVLQTLEI NPNLLLPDGK 120
  121 KKYVKLVAQF SNIYRAEKVM AVSFRSGHIF IQTDKPIYNP GDKVRFRAFV SDLEFRSSER 180
  181 TISLEIQNPD GIAVHGIGRV KAIDGVFSDI FSLSTVVKYA LRIVQLCLLP AFNVTLTPKT 240
  241 SHLSLDAEKL EVEITARYLY GAQVKGVAYV LFGIEINGEK KRLTSMKQID DVLNGGSVSL 300
  301 TMEEIKRAYP DINSLLGSTL YVKASVLTSS GSDLVEAEKS GIKIVKSPYM LTIKDTPKYY 360
  361 KPGLPLAMTV IVSNHDGSPT PNIPVKVTFL ESPISVHSGT INIHINMPKT HILYGNSQIL 420
  421 KVETVDPSLK PEQQAIQEVY VKPYSTFSGH DNFLHVSVGA SRVVVGGSVS VQMYIKSSLP 480
  481 NHRALVEHLT YIVLNKGKII QAGRVNVKGQ DVTSVHLLIT TEMLPAFRFV AYYVLPWQHR 540
  541 AEVVADSVFV DVEDRCVGSL NVGPVDGEIV SSYSPGSSFK FQVKGDVGAK VSLVAVDNAI 600
  601 FLLSKNRLTQ KKVWEVVDQA DMGCTAGGGK DNMGVFSDAG LMFHSSTGGS TDSKEDCSSK 660
  661 TKRRRRSAAK LQLRDQLEKA YSDELLQRCC VDGMKEIPMP YSCYRRSLYI TEDWSFFFVR 720
  721 DRVLQSMPKL HAEANVVGVR QDSYREVVVE EEEEAASVFE EDDLSDLEDI YVRSKFFESW 780
  781 LWTDIRLPST AKSDGLAVFP VDTVLPDSIT QWGFLAVSAS PEKGVCVAEP YNVRVWKPFF 840
  841 IDLRLPHSVS RNEQVEIKAV IHNYKNSTLE VRSTPSVVMV ILEKTEDMCS VAYTGQHRQQ 900
  901 VTVAAGSSKL ITYTIIPLKT GELPLQVTAV AASFMGQDAV KKNLRVVVEG IQTLKVRSFV 960
  961 LNPSEKGGSA GQQLIQVKKM QLDAVVPKSV PETFVNVRGD LLADSIDNSI KEDSLAALIR1020
 1021 MPGGCVEQNL ARITLPLIAA HYLDRSADWE IVGISRREEA IKYIQRGYEN QLNYKKSDDS1080
 1081 YPPYANEGTS TWITAYVVKV FSMAHSFINV NEKHLCGPLL YLLKNKQGYD GTFQEDNPVY1140
 1141 DTSMTGAMRG SEYKASLTAF VLIALAEAQD KVTCQDQEVN IRDKSRQAAG YLTEHFSRLT1200
 1201 RPYTAAIACY ALAVSNNACV KSMLLKFASP DHSHWPDSNN YFFTLEATGY ALLALIKSGH1260
 1261 MEEAEAPFRW LNEHRGIGGG YGSTQSTMVV LQALSEYLVK RPPPSDLNLL VQLSVPGRSD1320
 1321 VRWTFNPNLA YVARSSRVPL DQEFSVAASG NGKGVLEVVT VYHQLPDVYE NSTCNGFQLD1380
 1381 VSIAETNEKT SSDVEKSFRL NVNVRALEER QVRMVILDIG LPTGFEPENS DLELLTNSVD1440
 1441 RYINNFQVVD NLSDRGSLII HLFKVSNKEA EMISFRLNQK FKVGLLQPST VKVYQYYNKD1500
 1501 KSCSRFYSPP EDKQQLDQIC EGDVCRCSQG DCCVMKEDFA FFGKEQRNAA VCNGLHHAYR1560
 1561 VKLISISQSH YYQYEMEIVQ VIKEGTEEGL NEKERRMFLS HASCRTRLNL KEGQEYLVIG1620
 1621 PITDVWNAGS TVSNKYVYTL GKETWVERWP DESECGSTLQ KKCDELKSFA KKLIEDGCQA1680
 1681 

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