YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148725506
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFRLMLMI SNQTFKILRC SALFSPRRTL FVTRQSLFRR QDAPVLRYNL ARFSQQSTST  60
   61 VEGTKKGEDT FLKWFLLLIP VTTFCLGTWQ VKRRKWKLEL ISELQSLTTS EPIPLPVDTM 120
  121 EIKQLEYRRV KVRGHFDHSK ELYILPRSPV DPEREAREAG RISSSGESGA NVITPFFCTD 180
  181 LGITILVNRG YVPKNKIKPE TRTKGQVIED VDLVGVVRLT EQRKPFVPEN NVEANRWHYR 240
  241 DLEAMAKVTG AEEIFIDAVL DSTVPGGPIG GQTRVTLRNE HLQYVITWYG LCAATSYMWY 300
  301 AKFIKRIAL

Type	Start	End	Confidence
Non-Cytoplasmic	1	283	0.79
Transmembrane Helix	284	301	0.72
Cytoplasmic	302	309	0.58