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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT4F_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSNQRVRLF MLCFCLVNNA VIAATEDENV ERKPYIVYMG EATENSLVEA AENHHNLLMT  60
   61 VIGDESKARE LKIYSYGKNI NGFVARLFPH EAEKLSREEG VVSVFKNTQR QLHTTRSWDF 120
  121 LGLVESKYKR SVGIESNIIV GVLDTGIDVE SPSFNDKGVG PPPAKWKGKC VTGNNFTRCN 180
  181 NKVIGAKYFH IQSEGLPDGE GDTAADHDGH GTHTSSTIAG VSVSSASLFG IANGTARGGV 240
  241 PSARIAAYKV CWDSGCTDMD MLAAFDEAIS DGVDIISISI GGASLPFFED PIAIGAFHAM 300
  301 KRGILTTCSA GNNGPGLFTV SNLAPWVMTV AANSLDRKFE TVVKLGNGLT ASGISLNGFN 360
  361 PRKKMYPLTS GSLASNLSAG GYGEPSTCEP GTLGEDKVMG KVVYCEAGRE EGGNGGQGQD 420
  421 HVVRSLKGAG VIVQLLEPTD MATSTLIAGS YVFFEDGTKI TEYINSTKNP QAVIFKTKTT 480
  481 KMLAPSISSF SARGPQRISP NILKPDISAP GLNILAAYSK LASVTGYPDD NRRTLFSIMS 540
  541 GTSMACPHAA AAAAYVKSFH PDWSPAAIKS ALMTTATPMR IKGNEAELSY GSGQINPRRA 600
  601 IHPGLVYDIT EDAYLRFLCK EGYNSTSIGL LTGDNSNNTT KKEYNCENIK RGLGSDGLNY 660
  661 PSLHKQVNST EAKVSEVFYR TVTNVGYGPS TYVARVWAPK GLRVEVVPKV MSFERPKEKR 720
  721 NFKVVIDGVW DETMKGIVSA SVEWDDSRGH LVRSPILLFR SDNDYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle