YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4678952, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEAQVDRS NGSDSSSPPI KLPPFITNLF AFLQPKPPPA TIDANAPKPT GEKEPLKSTY  60
   61 ETVTFPYNPP KSAEPIKFEA EPSSGRTSNS VILWQVYALG GFLVLKWAWA RWNERNERSD 120
  121 KKEATGDDDQ KDDDEDDQSS DGHED

Type	Start	End	Confidence
Non-Cytoplasmic	1	90	0.74
Transmembrane Helix	91	110	0.78
Cytoplasmic	111	145	0.57