YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	M2K5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPIQSPSGV ASPMKNRLRK RPDLSLPLPH RDVALAVPLP LPPPSSSSSA PASSSAISTN  60
   61 ISAAKSLSEL ERVNRIGSGA GGTVYKVIHT PTSRPFALKV IYGNHEDTVR RQICREIEIL 120
  121 RSVDHPNVVK CHDMFDHNGE IQVLLEFMDQ GSLEGAHIWQ EQELADLSRQ ILSGLAYLHR 180
  181 RHIVHRDIKP SNLLINSAKN VKIADFGVSR ILAQTMDPCN SSVGTIAYMS PERINTDLNH 240
  241 GRYDGYAGDV WSLGVSILEF YLGRFPFAVS RQGDWASLMC AICMSQPPEA PATASQEFRH 300
  301 FVSCCLQSDP PKRWSAQQLL QHPFILKATG GPNLRQMLPP PRPLPSAS

Type	Start	End	Confidence
Signal Peptide	1	49	0.85
N-region	1	40
H-region	41	46
C-region	47	49
Cleavage Site	49	50
Non-Cytoplasmic	50	348	0.99