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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9802560
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKWFLNLVF VALNHSRFGI SRSKTAWNLD GGFTDIDICC QSGNYVFTIK KKVTLLAAYR  60
   61 NSSACGSRWR RKKKKKKNLK RAMKHIFKKL HRGGNQEQQN RTNDAAPPSD QNRIHVSANP 120
  121 PQATPSSVTE TLPVAGATSS MASPAPTAAS NRADYMSSEE EYQVQLALAI SASNSQSSED 180
  181 PEKHQIRAAT LLSLGSHQRM DSRRDSSEVV AQRLSRQYWE YGVLDYEEKV VDSFYDVYSL 240
  241 STDSAKQGEM PSLEDLESNH GTPGFEAVVV NRPIDSSLHE LLEIAECIAL GCSTTSVSVL 300
  301 VQRLAELVTE HMGGSAEDSS IVLARWTEKS SEFKAALNTC VFPIGFVKIG ISRHRALLFK 360
  361 VLADSVRLPC RLVKGSHYTG NEDDAVNTIR LEDEREYLVD LMTDPGTLIP ADFASASNNT 420
  421 VEPCNSNGNK FPTAQFSNDV PKLSEGEGSS HSSMANYSSS LDRRTEAERT DSSYPKVGPL 480
  481 RNIDYSSPSS VTSSTQLENN SSTAIGKGSR GAIIECSRTN MNIVPYNQNS EEDPKNLFAD 540
  541 LNPFQNKGAD KLYMPTKSGL NNVDDFHQQK NNPLVGRSPA PMMWKNYSCN EAPKRKENSY 600
  601 IENLLPKLHR DPRYGNTQSS YATSSSNGAI SSNVHGRDNV TFVSPVAVPS SFTSTENQFR 660
  661 PSIVEDMNRN TNNELDLQPH TAAVVHGQQN DESHIHDHRK YTSDDISTGC DPRLKDHEST 720
  721 SSSLDSTSYR NDPQVLDDAD VGECEIPWND LVIAERIGLA YSFWRSYVLM LILFWLGSYG 780
  781 EVYHADWHGT EVAVKKFLDQ DFSGAALAEF RSEVSHKFTC VYLLVRIMRR LRHPNVVFFL 840
  841 GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH 900
  901 RDLKTPNLLV DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV 960
  961 YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII LECWQTDPNL1020
 1021 RPSFAQLTEV LKPLNRLGTP VNIIVGSHVW FEDPEVAWID GEVEKINGQE VVIQATTGKK1080
 1081 VQSSITEILT FQLHTYSVTA KLSKIYPKDV EAPAGGVDDM TKLSYLHEPG VLQNLKIRYE1140
 1141 LNEIYTYTGN ILIAINPFQR LPHIYDAHMM QQYKGAPLGE LSPHVFAVAD VAYRAMINEG1200
 1201 KSNSILVSGE SGAGKTETTK MLMRYLAYLG GRAVTEGRTV EQQVLESNPV LEAFGNAKTV1260
 1261 RNNNSSRFGK FVEIQFDKQG RISGAAIRTY LLERSRVCQI SDPERNYHCF YLLCAAPQEE1320
 1321 IEKYKLGHPK TFHYLNQSKC FELVGISDAH DYLATRRAMD IVGISEKEQV SFCKQLHLEA1380
 1381 IFRVVAAILH IGNIDFTKGK EVDSSVPKDE KSKFHLKTAA ELLMCDLKAL EDALCKRVMI1440
 1441 TPEEVIKRSL DPQSAVTSRD GLAKTVYSRL FDWLVDKINK SIGQDANSRS LIGVLDIYGF1500
 1501 ESFKTNRLAV CHSLLIPFCC SFEQFCINFT NEKLQQHFNQ HVFKMEQEEY TKEAIDWSYI1560
 1561 EFVDNQDVLD LIEKVISEPR KDNVNKITPH TGWILLSHFI SPFIFHLQKP GGIVALLDEA1620
 1621 CMFPKSTHET FANKLYQTFK THKRFIKPKL SRTDFAVAHY AGEVLYQSEL FLDKNKDYVI1680
 1681 PEHQDLLGAS KCPFVVGLFP PLPEETSKSS KFSSIGSRFK LQLQQLMETL NCTEPHYIRC1740
 1741 VKPNNLLKPA IFENVNIMQQ LRCGGVLEAI RISCAGYPTR KPFFEFINRF GLLSPAALEG1800
 1801 NFDEKVACQK ILDNMGLKGY QIGKTKVFLR AGQMAELDAR RAEVLSSAAK KIQRRIRTHQ1860
 1861 AQKRFIVLRK ATISLQAICR GRLSCKHYDN LRREAAAVKI QKNGRRHYSR KSYKKLHVAS1920
 1921 LVVQTGLRAM AARKQFRFRK QTKAATIVQA QWRCHRAISY YKKLKNGVVL SQTRWRGRLA1980
 1981 KRELRKLKMA ARETGALKEA KDMLEKKVEE LTYRVQLEKR SRGDLEEAKT QEILKLKSSF2040
 2041 EEMRKKVDET NALLLKEREA AKKAAEEAPP VIKETQILVE DTKKIELMTE ELESVKVTLE2100
 2101 NEKQRADDAV RKFEEAQESL EDKKKKLEET EKKGQQLQES LTRMEEKCSN LESENKVLRQ2160
 2161 QAVSMAPNKF LSGRSRSILQ RGSESGHLAV DARSNLDLHS HSINHRDPSE VEDKPQKSLN2220
 2221 EKQQENQDLL IRSIVQHLGF QGNRPITACI IYKCLLQWRS FEVERTSVFD RIIQTIGHAI2280
 2281 ETQDNNNTLA YWLSNTSTLL LLLQRTLKAS GAAGMAPQRR RSSSATLFGR MSQSFRGAPP2340
 2341 GVNLAMINGA AGGGADTFRQ VEAKYPALLF KQQLTAYVEK IYGMIRDNLK KEISPLLGLC2400
 2401 IQAPRTSRAS LVKGASRSVG NTAAQQALIA HWQGIVKSLT NFLNTLKSNN VPSFLVRKVF2460
 2461 TQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KAGLSELEHW CFKATNEYAG SSWDELKHIR2520
 2521 QAIGFLVVHQ KPKKTLDEIS HDLCPVLSIQ QLYRISTMYW DDKYGTHSVS PDVSDHLKLL2580
 2581 MICVIANMRV LMTEDSNNAV SNSFLLDDDS SIPFSVDDLS KSMEKFEIAD IEPPPLIREN2640
 2641 SGFSFLLPVS E

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