YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SCP52_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTFSPKLLL LLLLVLRHHA ESGSIVKFLP GFEGPLPFEL ETGYIGIAKY WANDERVREA  60
   61 LQIRKGSIGK WIRCNSNIHY DDDIISSIPY HMNNSINGYR SLIYSGDHDM EVPFLATEAW 120
  121 IRSLNYPIID DWRPWIINNQ IAGYTMTYAN KMTYATIKAS GHTAEYKPAE SFIMFQRWIS 180
  181 GQPL

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	184	0.99