YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MES4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNNKKRFV LVHGLCHGAW CWYKVKTHLE AVGHCVTAVD LAASGINMTR LEEIQTLKDY  60
   61 CKPLLELLNS LGSDDDKVIL VAHSMGGIPA ALASDIFPSK IATIVFLTAF MPDTRNLPAY 120
  121 VYQKLIRSVP QEGWLDTVFG TYGKHECPLE FALFGPKFMA KNLYQLSPVQ DLELAKMLVR 180
  181 VNPIITNNLA GTRSFSEEGY GTVTRIYIVC GEDMAVPEDY QWWMIKNFPP KEVMEIKCAD 240
  241 HMAMFSKPHK LCALLVEIAC KYA

Type	Start	End	Confidence
Signal Peptide	1	21	0.78
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	263	0.99