YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y2979_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFAWCVRRS ASKLASACGQ ARSISAVVNR PSLALNPSPL SPFVSRGFLY TMAVDKLSSE  60
   61 QTLHLVIDSE LNSALQTDDP NLNEEMAPGS FPLKIRDKPG DQSVTLTAYY NDERIHVDVG 120
  121 MPYLGDDVID VFGPNNDELS FPLVVTVIKK NGVSIEFTCQ AYADYIDLTD LTVHDYQYQM 180
  181 GETDWPRFKN LDDNLKKAFH RYLATRLDAN ITKLLHKYMV SKIKREYLLW LKNVNKFVDG 240
  241

Type	Start	End	Confidence
Signal Peptide	1	26	0.66
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	240	0.99