YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XTH6_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKIYSPSFP GTLCLCIFTL LTLMFIRVSA RPATFVEDFK AAWSESHIRQ MEDGKAIQLV  60
   61 LDQSTGCGFA SKRKYLFGRV SMKIKLIPGD SAGTVTAFYM NSDTATVRDE LDFEFLGNRS 120
  121 GQPYSVQTNI FAHGKGDREQ RVNLWFDPSM DYHTYTILWS HKHIVFYVDD VPIREYKNNE 180
  181 AKNIAYPTSQ PMGVYSTLWE ADDWATRGGL EKIDWSKAPF YAYYKDFDIE GCPVPGPTFC 240
  241 PSNPHNWWEG YAYQSLNAVE ARRYRWVRVN HMVYDYCTDR SRFPVPPPEC RA

Type	Start	End	Confidence
Signal Peptide	1	30	0.98
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	292	0.99