YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XTH3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYMRIFSVF VVTLWIIRVD ARVFGGRGIE KFVTFGQNYI VTWGQSHVST LHSGEEVDLY  60
   61 MDQSSGGGFE SKDAYGSGLF EMRIKVPSGN TGGIVTAFYL TSKGGGHDEI DFEFLGNNNG 120
  121 KPVTLQTNLF LNGEGNREER FLLWFNPTKH YHTYGLLWNP YQIVFYVDNI PIRVYKNENG 180
  181 VSYPSKPMQV EASLWNGDDW ATDGGRTKVN WSYSPFIAHF RDFALSGCNI DGRSNNVGAC 240
  241 ESSNYWWNAG NYQRLSGNEQ KLYEHVRSKY MNYDYCTDRS KYQTPPRECY

Type	Start	End	Confidence
Signal Peptide	1	21	0.58
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	290	0.99