YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XTH20_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFCGRRFA FLIIFLFAAQ YERVYAGSFH KDVQIHWGDG RGKILDNVGN LLSLSLDKFS  60
   61 GSGFQSHQEF LYGKVEVQMK LVPGNSAGTV TTFYLKSPGT TWDEIDFEFL GNISGHPYTL 120
  121 HTNVYTKGTG DKEQQFHLWF DPTVDFHTYC IIWNPQRVIF TIDGIPIREF KNSEALGVPF 180
  181 PKHQPMRLYA SLWEAEHWAT RGGLEKTDWS KAPFTAFYRN YNVDACVWSN GKSSCSANSS 240
  241 WFTQVLDFKG KNRVKWAQRK YMVYNYCTDK KRFPQGAPPE CS

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	282	0.99