YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XTH19_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFTFLILF LFAAQSISVY AGSFHKDVKI HWGDGRGKIH DNQGKLLSLS LDKSSGSGFQ  60
   61 SNQEFLYGKA EVQMKLVPGN SAGTVTTFYL KSPGTTWDEI DFEFLGNISG HPYTLHTNVY 120
  121 TKGSGDKEQQ FHLWFDPTAN FHTYCITWNP QRIIFTVDGI PIREFMNAES RGVPFPTKQP 180
  181 MRLYASLWEA EHWATRGGLE KTDWSKAPFT AYYRNYNVEG CVWVNGKSVC PANSQWFTQK 240
  241 LDSNGQTRMK GVQSKYMVYN YCSDKKRFPR GVPPECS

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	277	0.99